Matching with don't-cares and a small number of mismatches

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Matching with don't-cares and a small number of mismatches

In matching with don’t-cares and k mismatches we are given a pattern of length m and a text of length n, both of which may contain don’t-cares (a symbol that matches all symbols), and the goal is to find all locations in the text that match the pattern with at most k mismatches, where k is a parameter. We present new algorithms that solve this problem using a combination of convolutions and a d...

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Parameterized matching with mismatches

The problem of approximate parameterized string searching consists of finding, for a given text t = t1t2 . . . tn and pattern p = p1p2 . . . pm over respective alphabets Σt and Σp , the injection πi from Σp to Σt maximizing the number of matches between πi(p) and ti ti+1 . . . ti+m−1 (i = 1,2, . . . , n −m + 1). We examine the special case where both strings are run-length encoded, and further ...

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Fast String Matching with Mismatches

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ژورنال

عنوان ژورنال: Information Processing Letters

سال: 2009

ISSN: 0020-0190

DOI: 10.1016/j.ipl.2008.10.016